BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012C06SP1|AL426338
(763 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1414 1415 0.0
>3x_Contig1414
Length = 7923
Score = 1415 bits (713), Expect = 0.0
Identities = 755/763 (98%), Gaps = 5/763 (0%)
Strand = Plus / Minus
Query: 1 cagctaactcaaaatcatattrataaacggtttagtattaggaatgtaatgaccaccgga 60
|||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 2031 cagccaactcaaaatcatattgataaacggtttagtattaggaatgtagtgaccaccgga 1972
Query: 61 atgctttaccatagtgcgtgttgaaggatcacacgcttcgaacaacttcattgacctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1971 atgctttaccatagtgcgtgttgaaggatcacacgcttcgaacaacttcattgacctttc 1912
Query: 121 ttcagtaacgagggaatctagttcccccacaatatgtagagtttttaattggattggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1911 ttcagtaacgagggaatctagttcccccacaatatgtagagtttttaattggattggatg 1852
Query: 181 tgtctcgtacggagcttggaactgttctggttcgaatttgaaaccggagaagtacatagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1851 tgtctcgtacggagcttggaactgttctggttcgaatttgaaaccggagaagtacatagc 1792
Query: 241 gaatttgaaaggcggttgttcctccttgtttagcggcagaatggaccataaatcagtgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1791 gaatttgaaaggcggttgttcctccttgtttagcggcagaatggaccataaatcagtgga 1732
Query: 301 tagataccctgctagtccagcaccttgactgaatccaccaattccatcaaagggaccgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1731 tagataccctgctagtccagcaccttgactgaatccaccaattccatcaaagggaccgtt 1672
Query: 361 ttctttaatatattgtgccagatattctaacagttctggttctagcgtgtagctatgagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1671 ttctttaatatattgtgccagatattctaacagttctggttctagcgtgtagctatgagt 1612
Query: 421 ttctggatccttcaagaaccagccatacatgccagtagatttctctgaatctctcaagtc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1611 ttctggatccttcaagaaccagccatacatgccagtagatttctctgaatctctcaag-c 1553
Query: 481 cacttctgaatcattgaagtctttggaatgaagcttgtaaggtccacaggggtagatgag 540
|||||||| ||||||||||||||| ||||||||||||| ||||||||| |||||||||||
Sbjct: 1552 cacttctg-atcattgaagtcttt-gaatgaagcttgt-aggtccaca-gggtagatgag 1497
Query: 541 ttcatatccctttttctgtagctgtttcctcatccctgctgtcttagctctgaatatgac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1496 ttcatatccctttttctgtagctgtttcctcatccctgctgtcttagctctgaatatgac 1437
Query: 601 atcggattgggagtatccatgtaacatcaacactttcttggaggtgctcattttgcaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1436 atcggattgggagtatccatgtaacatcaacactttcttggaggtgctcattttgcaaat 1377
Query: 661 tgatgttcgtaacgttctgtgattccaaatgcagaatggtctactttaaagatgcactga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1376 tgatgttcgtaacgttctgtgattccaaatgcagaatggtctactttaaagatgcactga 1317
Query: 721 gttatgtaataagctatatttgtgttcattgcatgtatacggt 763
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1316 gttatgtaataagctatatttgtgttcattgcatgtatacggt 1274
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5085
Number of Sequences: 1807
Number of extensions: 5085
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 763
length of database: 10,358,551
effective HSP length: 16
effective length of query: 747
effective length of database: 10,329,639
effective search space: 7716240333
effective search space used: 7716240333
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)